# Posts by Tag

This page displays the site’s tags in alphabetical order and shows how many posts there are per tag, makes anchor links for each tag, then outputs posts by tag in reverse chronological order.

### Posts by tag

- Advanced (1)
- Advice (1)
- Advocacy (1)
- BEF (3)
- BES (1)
- Basic (3)
- Bayesian (2)
- Biodiversity (8)
- Biology (1)
- Conference (3)
- Conservation (3)
- Convention (1)
- Defense (1)
- Ecolog (2)
- Entomologen (1)
- FD (1)
- First (1)
- Fun (1)
- GLM (5)
- GLMM (5)
- Genre (1)
- IF (1)
- IPBES (1)
- Informatics (1)
- Internet (1)
- Introduction (1)
- LM (8)
- LRT (1)
- Lecture (1)
- MySQL (1)
- NLS (1)
- Nerdy (2)
- Neutral theory (1)
- Perl (2)
- PhD (1)
- Probability (1)
- R (54)
- Random-effect (1)
- SEMs (4)
- SFE (1)
- STAN (2)
- Simulation (3)
- Society (1)
- Spat (1)
- Spatial Data (2)
- Stat (1)
- Statistics (13)
- Sweave (1)
- UN (2)
- birthday (1)
- bootstrap (1)
- causality (1)
- communication (1)
- contrasts (1)
- covariance (1)
- data (1)
- dplyr (1)
- ecology (20)
- ecosystem (1)
- education (1)
- erasmus (1)
- europe (1)
- evenness (1)
- fees (1)
- france (1)
- french (1)
- ggplot (3)
- ggplot2 (1)
- grant (1)
- insects (1)
- interaction (2)
- journalism (1)
- lme4 (5)
- manifeste (1)
- model check (1)
- multilevel (1)
- multiple testing (1)
- nR (1)
- plot (1)
- prediction (2)
- rJava (1)
- raster (3)
- residuals (1)
- rome (1)
- rvest (1)
- science (2)
- time-series (1)
- ubuntu (1)
- élection (3)

#### Advanced

- 27 Nov 12: Assigning Names to object within a Loop in R

#### Advice

- 10 Apr 17: About my PhD defense in Germany

#### Advocacy

#### BEF

- 16 Nov 14: Talk at the meeting of the entomological society of Thuringia
- 12 Nov 14: Biodiversity and Ecosystem Function research: Part 1 setting the scene
- 03 Nov 14: Lecture on Biodiversity Ecosystem function

#### BES

- 12 Dec 14: Summary and thoughts of the BES/SFE meeting

#### Basic

- 07 Dec 12: Correlation and Linear Regression in R
- 21 Nov 12: Manipulating data frame in R
- 13 Nov 12: R at your fingertips

#### Bayesian

- 08 Dec 16: Crossed and Nested hierarchical models with STAN and R
- 10 Nov 16: Hierarchical models with RStan (Part 1)

#### Biodiversity

- 14 Aug 16: Simulating local community dynamics under ecological drift
- 18 Jul 16: Exploring the diversity of Life using Rvest and the Catalog of Life
- 25 May 16: Discussion on Biodiversity trends in the Anthropocene
- 10 Jan 15: What roles should ecologist have in the society?
- 12 Dec 14: Summary and thoughts of the BES/SFE meeting
- 12 Nov 14: Biodiversity and Ecosystem Function research: Part 1 setting the scene
- 03 Aug 13: Why should we care about Biodiversity?
- 23 Nov 12: Threat to biodiversity (about butterfly, polar bears and Brad Pitt);

#### Biology

- 03 Aug 13: Why should we care about Biodiversity?

#### Conference

- 14 Sep 16: 150 years of ecology: lessons for the future
- 01 Oct 15: Ecology at the Interface in Rome
- 16 Sep 14: First scientific conference; Inspiration, Meetings and Walking

#### Conservation

- 16 Sep 14: First scientific conference; Inspiration, Meetings and Walking
- 23 Nov 12: Threat to biodiversity (about butterfly, polar bears and Brad Pitt);
- 20 Nov 12: The United Nations and the safeguarding of the environment (Basic)

#### Convention

#### Defense

- 10 Apr 17: About my PhD defense in Germany

#### Ecolog

- 24 Jan 17: Prediction in ecology -implementing a priority.
- 02 Dec 13: First Lecture ever

#### Entomologen

#### FD

#### First

#### Fun

#### GLM

- 17 May 17: Adding standard errors for interaction terms
- 22 Jul 15: Count data: To Log or Not To Log
- 16 Apr 14: Checking (G)LM model assumptions in R
- 02 Dec 13: First Lecture ever
- 20 Jul 13: Generalized Linear Modelling in R (part 1)

#### GLMM

- 17 Jun 15: Confidence Intervals for prediction in GLMMs
- 26 Feb 15: Generating ANOVA-like table from GLMM using parametric bootstrap
- 13 Jul 14: Using bootMer to do model comparison in R
- 12 Mar 14: Generalized Linear Mixed Models in Ecology and in R
- 02 Mar 14: Computing R square for Generalized Linear Mixed Models in R

#### Genre

- 21 Feb 14: Science vs Obscurantisme

#### IF

#### IPBES

- 30 Jan 13: IPBES is on its way

#### Informatics

- 14 Nov 12: Perl Basics

#### Internet

- 10 Dec 13: Libertés individuelles et internet

#### Introduction

- 24 Jan 14: Bringing together R and LaTex

#### LM

- 03 Oct 17: Interpreting three-way interactions in R
- 17 May 17: Adding standard errors for interaction terms
- 08 Oct 15: Plotting regression curves with confidence intervals for LM, GLM and GLMM in R
- 22 Jul 15: Count data: To Log or Not To Log
- 25 Mar 15: A function to help graphical model checks of lm and ANOVA
- 13 Jan 15: Using and interpreting different contrasts in linear models in R
- 23 Nov 14: Interpreting regression coefficient in R
- 16 Apr 14: Checking (G)LM model assumptions in R

#### LRT

- 13 Jul 14: Using bootMer to do model comparison in R

#### Lecture

- 03 Nov 14: Lecture on Biodiversity Ecosystem function

#### MySQL

- 02 Feb 13: Bringing the powers of SQL to R;

#### NLS

- 25 Aug 13: Non-linear regression in R

#### Nerdy

- 18 Dec 16: Spatial Dynamic in a Host-Parasitoid system
- 18 Apr 14: Fonctions récursives (avec R)

#### Neutral theory

#### Perl

- 01 Jun 14: Regular expression and associated functions in R
- 14 Nov 12: Perl Basics

#### PhD

- 10 Apr 17: About my PhD defense in Germany

#### Probability

- 20 Dec 13: Simulating dice throws in R

#### R

- 16 Mar 18: Recurrent themes in my work: covariance
- 26 Nov 17: Simulating SEMs: part 2 extensions
- 11 Nov 17: Categorical random effects with lme4
- 03 Oct 17: Interpreting three-way interactions in R
- 06 Aug 17: Introduction to point pattern analysis for ecologists
- 19 Jun 17: Adding group-level predictors in GLMM using lme4
- 17 May 17: Adding standard errors for interaction terms
- 08 May 17: Simulating SEMs for piecewiseSEM: part 1 the basics
- 03 Apr 17: Interpreting random effects in linear mixed-effect models
- 05 Feb 17: Patterns across 50 years of French presidential election
- 08 Dec 16: Crossed and Nested hierarchical models with STAN and R
- 10 Nov 16: Hierarchical models with RStan (Part 1)
- 04 Sep 16: Shiny and Leaflet for Visualization Awards
- 14 Aug 16: Simulating local community dynamics under ecological drift
- 18 Jul 16: Exploring the diversity of Life using Rvest and the Catalog of Life
- 11 Jun 16: Exploring Spatial Patterns and Coexistance
- 08 Oct 15: Plotting regression curves with confidence intervals for LM, GLM and GLMM in R
- 31 Aug 15: Two little annoying stats detail
- 22 Jul 15: Count data: To Log or Not To Log
- 17 Jun 15: Confidence Intervals for prediction in GLMMs
- 27 Apr 15: Exploration of Functional Diversity indices using Shiny
- 25 Mar 15: A function to help graphical model checks of lm and ANOVA
- 26 Feb 15: Generating ANOVA-like table from GLMM using parametric bootstrap
- 13 Jan 15: Using and interpreting different contrasts in linear models in R
- 23 Nov 14: Interpreting regression coefficient in R
- 11 Oct 14: DataFrame manipulation in R from basics to dplyr
- 10 Aug 14: Ploting SEMs in R using semPlot
- 13 Jul 14: Using bootMer to do model comparison in R
- 01 Jun 14: Regular expression and associated functions in R
- 05 May 14: Importing 100 years of climate change into R
- 16 Apr 14: Checking (G)LM model assumptions in R
- 08 Apr 14: Interpreting interaction coefficient in R (Part1 lm) UPDATED
- 12 Mar 14: Generalized Linear Mixed Models in Ecology and in R
- 02 Mar 14: Computing R square for Generalized Linear Mixed Models in R
- 24 Feb 14: Adding color to R plot: a function
- 20 Dec 13: Simulating dice throws in R
- 25 Oct 13: Manipulation of the legend in ggplot2 (R)
- 25 Aug 13: Non-linear regression in R
- 20 Jul 13: Generalized Linear Modelling in R (part 1)
- 13 Jun 13: Advanced settings in ggplot2 (R)
- 31 May 13: Using the rasterVis package for raster plotting (in R)
- 15 May 13: Drawing lines in raster cells (in R), with application to species distribution mapping
- 13 Apr 13: Ploting raster stacks (in R)
- 30 Mar 13: Making maps in R using ggplot,
- 11 Mar 13: Taking control of the legend in raster (in R)
- 24 Feb 13: Using Spatial Data in R;
- 13 Feb 13: The day I stoped using for loops (in R);
- 02 Feb 13: Bringing the powers of SQL to R;
- 24 Jan 13: Making Graphs using ggplot2 in R:
- 07 Dec 12: Correlation and Linear Regression in R
- 27 Nov 12: Assigning Names to object within a Loop in R
- 21 Nov 12: Manipulating data frame in R
- 14 Nov 12: The 6 functions that save your life (in R)
- 13 Nov 12: R at your fingertips

#### Random-effect

#### SEMs

- 26 Nov 17: Simulating SEMs: part 2 extensions
- 10 Jul 17: Cause, mechanism and prediction in ecology
- 08 May 17: Simulating SEMs for piecewiseSEM: part 1 the basics
- 10 Aug 14: Ploting SEMs in R using semPlot

#### SFE

- 12 Dec 14: Summary and thoughts of the BES/SFE meeting

#### STAN

- 08 Dec 16: Crossed and Nested hierarchical models with STAN and R
- 10 Nov 16: Hierarchical models with RStan (Part 1)

#### Simulation

- 26 Nov 17: Simulating SEMs: part 2 extensions
- 08 May 17: Simulating SEMs for piecewiseSEM: part 1 the basics
- 18 Dec 16: Spatial Dynamic in a Host-Parasitoid system

#### Society

#### Spat

- 30 Mar 13: Making maps in R using ggplot,

#### Spatial Data

- 06 Aug 17: Introduction to point pattern analysis for ecologists
- 24 Feb 13: Using Spatial Data in R;

#### Stat

- 02 Dec 13: First Lecture ever

#### Statistics

- 06 Aug 17: Introduction to point pattern analysis for ecologists
- 17 May 17: Adding standard errors for interaction terms
- 17 Apr 17: How not to control for multiple testing
- 19 Feb 17: Making a case for hierarchical generalized models
- 08 Dec 16: Crossed and Nested hierarchical models with STAN and R
- 10 Nov 16: Hierarchical models with RStan (Part 1)
- 08 Oct 15: Plotting regression curves with confidence intervals for LM, GLM and GLMM in R
- 22 Jul 15: Count data: To Log or Not To Log
- 07 Dec 12: Correlation and Linear Regression in R
- 27 Nov 12: Assigning Names to object within a Loop in R
- 21 Nov 12: Manipulating data frame in R
- 14 Nov 12: The 6 functions that save your life (in R)
- 13 Nov 12: R at your fingertips

#### Sweave

- 24 Jan 14: Bringing together R and LaTex

#### UN

- 30 Jan 13: IPBES is on its way
- 20 Nov 12: The United Nations and the safeguarding of the environment (Basic)

#### birthday

- 01 Nov 14: Happy birthday biologyforfun

#### bootstrap

#### causality

- 10 Jul 17: Cause, mechanism and prediction in ecology

#### communication

#### contrasts

#### covariance

- 16 Mar 18: Recurrent themes in my work: covariance

#### data

#### dplyr

#### ecology

- 16 Mar 18: Recurrent themes in my work: covariance
- 18 Oct 17: Mind the gap: when the news article run ahead of the science
- 10 Jul 17: Cause, mechanism and prediction in ecology
- 17 Apr 17: How not to control for multiple testing
- 19 Feb 17: Making a case for hierarchical generalized models
- 24 Jan 17: Prediction in ecology -implementing a priority.
- 18 Dec 16: Spatial Dynamic in a Host-Parasitoid system
- 14 Sep 16: 150 years of ecology: lessons for the future
- 04 Sep 16: Shiny and Leaflet for Visualization Awards
- 14 Aug 16: Simulating local community dynamics under ecological drift
- 18 Jul 16: Exploring the diversity of Life using Rvest and the Catalog of Life
- 11 Jun 16: Exploring Spatial Patterns and Coexistance
- 25 May 16: Discussion on Biodiversity trends in the Anthropocene
- 01 Oct 15: Ecology at the Interface in Rome
- 22 Jul 15: Count data: To Log or Not To Log
- 27 Apr 15: Exploration of Functional Diversity indices using Shiny
- 20 Feb 15: Evenness effect on ecosystem functioning
- 10 Jan 15: What roles should ecologist have in the society?
- 12 Nov 14: Biodiversity and Ecosystem Function research: Part 1 setting the scene
- 10 Nov 13: Will the next generation ecologists be parasites?

#### ecosystem

- 20 Feb 15: Evenness effect on ecosystem functioning

#### education

- 30 May 17: On the price of (my) higher education

#### erasmus

- 30 May 17: On the price of (my) higher education

#### europe

- 17 May 14: Pourquoi je vais aller voter le 25 mai

#### evenness

- 20 Feb 15: Evenness effect on ecosystem functioning

#### fees

- 30 May 17: On the price of (my) higher education

#### france

#### french

#### ggplot

- 13 Jun 13: Advanced settings in ggplot2 (R)
- 30 Mar 13: Making maps in R using ggplot,
- 24 Jan 13: Making Graphs using ggplot2 in R:

#### ggplot2

- 25 Oct 13: Manipulation of the legend in ggplot2 (R)

#### grant

- 30 May 17: On the price of (my) higher education

#### insects

#### interaction

- 03 Oct 17: Interpreting three-way interactions in R
- 08 Apr 14: Interpreting interaction coefficient in R (Part1 lm) UPDATED

#### journalism

#### lme4

- 11 Nov 17: Categorical random effects with lme4
- 19 Jun 17: Adding group-level predictors in GLMM using lme4
- 03 Apr 17: Interpreting random effects in linear mixed-effect models
- 08 Oct 15: Plotting regression curves with confidence intervals for LM, GLM and GLMM in R
- 31 Aug 15: Two little annoying stats detail

#### manifeste

- 10 Dec 13: Libertés individuelles et internet

#### model check

#### multilevel

#### multiple testing

- 17 Apr 17: How not to control for multiple testing

#### nR

#### plot

- 24 Feb 14: Adding color to R plot: a function

#### prediction

- 10 Jul 17: Cause, mechanism and prediction in ecology
- 24 Jan 17: Prediction in ecology -implementing a priority.

#### rJava

- 09 Feb 14: Installing rJava in R>=3.0

#### raster

- 31 May 13: Using the rasterVis package for raster plotting (in R)
- 15 May 13: Drawing lines in raster cells (in R), with application to species distribution mapping
- 11 Mar 13: Taking control of the legend in raster (in R)

#### residuals

- 31 Aug 15: Two little annoying stats detail

#### rome

- 01 Oct 15: Ecology at the Interface in Rome

#### rvest

#### science

- 24 Jan 17: Prediction in ecology -implementing a priority.
- 10 Nov 13: Will the next generation ecologists be parasites?

#### time-series

- 05 May 14: Importing 100 years of climate change into R

#### ubuntu

- 09 Feb 14: Installing rJava in R>=3.0